filename locus chromosomes count_sum dataset popname ethnicity region country geo popnotes latit longit completeness resolution method citation author year title journal volume pages email redundancy country_lab lab_pi ua_ethnic_code ethnic_code freq_code typing_comments admixture admixture_ethnicities haplotyped? genotyped? controls? disease analyses_theirs analyses_others analyses_ours mack_comments initials
DRB1_EuroAm_2003.pop DRB1 3798 3798 lit EuroAm_2003 Caucasian 03-EUR 3mig Collaborative study involving a large sample of European Americans. 38N 97W 1 1 SSOPH, SSP-PCR, SBT {KMS+03} Klitz 2003 New HLA haplotype frequency reference standards: High-resolution and large sample typing of HLA DR-DQ haplotypes in a sample of European Americans Tissue Antigens 62 296-307 klitz@socrates.berkeley.edu Fernandez-Vina 13 1 9 labs participated in high-res testing. DQA1 and DQB1 were typed by SSOPH in 8 labs and by SSP-PCR in 1 lab. DRB1 alleles identified by SSOPH in 7 labs, by SBT in 1 lab and by a combo of SBT and SSP-PCR in 1 lab. Polymorphs outside exon 2 generally not investigated N Y Y N JN
DRB1 count
0101 346
0102 53
0103 24
0301 501
0401 391
0402 37
0403 25
0404 150
0405 13
0406 3
0407 36
0408 11
0701 564
0801 86
0802 1
0803 4
0804 1
0901 31
1001 27
1101 216
1102 6
1103 13
1104 106
1201 41
1301 215
1302 158
1303 28
1305 10
1401 77
1404 1
1501 551
1502 26
1503 1
1601 36
1602 9